Difference between revisions of "Team:NCTU Formosa/Description"

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<h1>2017 NCTU_Formosa</h1>
  
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<h1>AI Green Fingers</h1>
  
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<h2>Abstract:</h2>
<h1>Description</h1>
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<p>Tell us about your project, describe what moves you and why this is something important for your team.</p>
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<p1>&nbsp;&nbsp;Fungus is the major disease for plants and has caused a tremendous financial loss in agriculture. We aim to use databases to find effective and also harmless anti-fungal peptides, with IOT forecast system to save fungus-infected plants. We hope to solve both the fungal and environmental hazards, help our farmers, and put sustainable development into practice through setting up green agriculture.<br></p1>
  
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<h2>Project:</h2>
  
<h5>What should this page contain?</h5>
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<h4>Databases for Peptide Choosing</h4>
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<li> A clear and concise description of your project.</li>
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<li>A detailed explanation of why your team chose to work on this particular project.</li>
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<li>References and sources to document your research.</li>
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<li>Use illustrations and other visual resources to explain your project.</li>
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&nbsp;&nbsp;First we connect four databases to know the relations among the whole fungal infection process.<br></p1>
  
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&nbsp;&nbsp;Then, we use sequence analysis to screen peptides in databases, grouping them by different conserved domains, followed by filtering with other conditions like peptide length and whether they are toxic to E. Coli in the hopes of choosing the final peptides.</p1>
  
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<h4>IOT Device for Advanced Application</h4>
  
<h5>Advice on writing your Project Description</h5>
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&nbsp;&nbsp;we use IOT device to connect the information of weather, humidity, temperature, and others, and build a model that can predict the incidence of disease.</p1>
  
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<p1><br>
We encourage you to put up a lot of information and content on your wiki, but we also encourage you to include summaries as much as possible. If you think of the sections in your project description as the sections in a publication, you should try to be consist, accurate and unambiguous in your achievements.  
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&nbsp;&nbsp;Furthermore, we design the smartphone application to bridge users with IoT device. We aim to use IOT device to record and update all the data in each farm for each user. In the end, we hope to build an immediately updating and customized model for every single farmer in need. </p1>
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<h2>Mechanism:</h2>
Judges like to read your wiki and know exactly what you have achieved. This is how you should think about these sections; from the point of view of the judge evaluating you at the end of the year.
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<p1>MiAMP1:bind to B-(1,3)-glucans in fungal cell wall.
  
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LaLTP: bind to the lipid on the cell membrane of the pathogen, causing permeabilization of the membrane.
  
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RsAFP2: interact with a kind of sphigolipid on the cell membrane of the pathogen, then induces cell death.
 
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<h5>References</h5>
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<p>iGEM teams are encouraged to record references you use during the course of your research. They should be posted somewhere on your wiki so that judges and other visitors can see how you thought about your project and what works inspired you.</p>
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<h5>Inspiration</h5>
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<p>See how other teams have described and presented their projects: </p>
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<li><a href="https://2016.igem.org/Team:Imperial_College/Description">2016 Imperial College</a></li>
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<li><a href="https://2016.igem.org/Team:Wageningen_UR/Description">2016 Wageningen UR</a></li>
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<li><a href="https://2014.igem.org/Team:UC_Davis/Project_Overview"> 2014 UC Davis</a></li>
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<li><a href="https://2014.igem.org/Team:SYSU-Software/Overview">2014 SYSU Software</a></li>
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Weatwin-1: contains a Barwin domain which was related to ROS production in fungal hyphae.</p1>
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<h2>Biobrick:<br></h2>
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<h2>Human Practice:<br></h2>
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<h2>Team Members:<br></h2>
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Revision as of 12:03, 30 June 2017

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> 2017 NCTU_Formosa

2017 NCTU_Formosa

AI Green Fingers

Abstract:

  Fungus is the major disease for plants and has caused a tremendous financial loss in agriculture. We aim to use databases to find effective and also harmless anti-fungal peptides, with IOT forecast system to save fungus-infected plants. We hope to solve both the fungal and environmental hazards, help our farmers, and put sustainable development into practice through setting up green agriculture.

Project:

Databases for Peptide Choosing


  First we connect four databases to know the relations among the whole fungal infection process.

  Then, we use sequence analysis to screen peptides in databases, grouping them by different conserved domains, followed by filtering with other conditions like peptide length and whether they are toxic to E. Coli in the hopes of choosing the final peptides.

IOT Device for Advanced Application


  we use IOT device to connect the information of weather, humidity, temperature, and others, and build a model that can predict the incidence of disease.

  Furthermore, we design the smartphone application to bridge users with IoT device. We aim to use IOT device to record and update all the data in each farm for each user. In the end, we hope to build an immediately updating and customized model for every single farmer in need.

Mechanism:

MiAMP1:bind to B-(1,3)-glucans in fungal cell wall. LaLTP: bind to the lipid on the cell membrane of the pathogen, causing permeabilization of the membrane. RsAFP2: interact with a kind of sphigolipid on the cell membrane of the pathogen, then induces cell death. Weatwin-1: contains a Barwin domain which was related to ROS production in fungal hyphae.

Biobrick:

Human Practice:

Team Members: